C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000483964 RP11-7F18.1-001 ENSG00000241961 9606 + 8:67406515-67407072 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastENST00000483964
Transcript ID Breast
ENST00000483964 0.023±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005BT CIL_0005BT_0002 CGP 8:67173512-67746345

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121001 Rpl17-ps5-001 processed_pseudogene Mus_musculus 0 545
ENSMUST00000118924 Rpl17-ps8-001 processed_pseudogene Mus_musculus 0 540
ENSMUST00000079716 Rpl17-201 protein_coding Mus_musculus 0 540
ENSMUST00000119383 Rpl17-ps10-001 processed_pseudogene Mus_musculus 0 529
ENSMUST00000120241 Rpl17-ps4-001 processed_pseudogene Mus_musculus 0 529
ENSMUST00000085340 Gm10268-201 processed_pseudogene Mus_musculus 0 529
ENSMUST00000119541 Rpl17-ps9-001 processed_pseudogene Mus_musculus 0 529
ENSMUST00000173076 Gm3617-001 processed_pseudogene Mus_musculus 0 518
ENSMUST00000119156 Rpl17-ps1-001 processed_pseudogene Mus_musculus 0 505
ENSMUST00000160969 Gm15795-001 processed_pseudogene Mus_musculus 0 488
ENSMUST00000162765 Gm9719-001 processed_pseudogene Mus_musculus 0 468
ENSMUST00000189856 RP23-110B5.4-001 processed_pseudogene Mus_musculus 0 449
ENSMUST00000120579 Gm11343-001 processed_pseudogene Mus_musculus 0 429
ENSMUST00000139696 Gm8062-001 processed_pseudogene Mus_musculus 0 427
ENSMUST00000164501 Gm17214-001 processed_pseudogene Mus_musculus 0 416
ENSMUST00000164064 Gm6133-201 protein_coding Mus_musculus 0 414
ENSMUST00000185744 RP23-304F24.3-001 processed_pseudogene Mus_musculus 0 409
ENSMUST00000119137 Gm15497-001 processed_pseudogene Mus_musculus 0 409
ENSMUST00000146593 Gm15843-001 processed_pseudogene Mus_musculus 0 401
ENSMUST00000121960 Gm14441-001 processed_pseudogene Mus_musculus 0 388
ENSMUST00000119012 Gm12380-001 processed_pseudogene Mus_musculus 0 374
ENSMUST00000120830 Gm13665-001 processed_pseudogene Mus_musculus 0 372
ENSMUST00000117990 Gm7831-001 processed_pseudogene Mus_musculus 0 366
ENSMUST00000121672 Gm11363-001 processed_pseudogene Mus_musculus 0 355
ENSMUST00000164923 Gm5277-201 protein_coding Mus_musculus 0 346
ENSMUST00000117144 Gm6429-001 processed_pseudogene Mus_musculus 0 300
ENSMUST00000118067 Gm11380-001 processed_pseudogene Mus_musculus 0 296
ENSMUST00000162128 Gm16111-001 processed_pseudogene Mus_musculus 0 254
ENSMUST00000118406 Gm15002-001 processed_pseudogene Mus_musculus 0 246

Loading