C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: F-box and leucine-rich repeat protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000484457 FBXL2-001 ENSG00000153558 9606 + 3:33277422-33388092 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungOvaryPlacentaENST00000484457
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Ovary Placenta
ENST00000484457 0.142±0.00 0.415±0.00 1.148±0.00 0.555±0.00 0.275±0.00 0.139±0.06 0.115±0.06 0.317±0.00 0.324±0.00 0.262±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001TS CIL_0001TS_0002 CGP 3:33150042-33403662

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005515 IPI:IEA protein binding
GO:0005516 IEA calmodulin binding
GO:0005737 TAS cytoplasm
GO:0006464 TAS cellular protein modification process
GO:0006508 TAS proteolysis
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0006513 IEA protein monoubiquitination
GO:0016020 IDA membrane
GO:0016032 IEA viral process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000035090 Fbxl2-001 protein_coding Mus_musculus 0 1777
ENSMUST00000143180 Fbxl2-002 nonsense_mediated_decay Mus_musculus 0 1620
ENSMUST00000117537 Fbxl2-005 protein_coding Mus_musculus 0 1537
ENSMUST00000139757 Fbxl2-003 retained_intron Mus_musculus 0 717
ENSMUST00000127352 Fbxl2-006 retained_intron Mus_musculus 0 640

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