C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L21 pseudogene 119
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000484462 RPL21P119-001 ENSG00000220793 9606 - 16:9156402-9156881 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000484462
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000484462 0.135±0.00 0.056±0.00 0.028±0.00 0.054±0.00 0.051±0.00 0.026±0.00 0.028±0.00 0.074±0.00 0.025±0.00 0.087±0.00 0.082±0.03 0.088±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000EM CIL_0000EM_0001 CGP 16:9091648-10182754

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000099272 Rpl21-003 protein_coding Mus_musculus 0 584
ENSMUST00000075453 Rpl21-002 protein_coding Mus_musculus 0 584
ENSMUST00000035983 Rpl21-001 protein_coding Mus_musculus 0 584
ENSMUST00000130005 Rpl21-ps8-001 processed_pseudogene Mus_musculus 0 573
ENSMUST00000121545 Rpl21-ps15-001 processed_pseudogene Mus_musculus 0 573
ENSMUST00000119328 Gm14648-001 processed_pseudogene Mus_musculus 0 573
ENSMUST00000155008 Gm10163-001 processed_pseudogene Mus_musculus 0 573
ENSMUST00000121309 Gm13370-001 processed_pseudogene Mus_musculus 0 573
ENSMUST00000089785 Gm10240-001 processed_pseudogene Mus_musculus 0 573
ENSMUST00000118352 Gm11703-001 processed_pseudogene Mus_musculus 0 573
ENSMUST00000071237 Rpl21-ps10-201 processed_pseudogene Mus_musculus 0 573
ENSMUST00000160079 Gm3355-001 processed_pseudogene Mus_musculus 0 564
ENSMUST00000119140 Gm12411-001 processed_pseudogene Mus_musculus 0 562
ENSMUST00000121563 Gm15682-001 processed_pseudogene Mus_musculus 0 556
ENSMUST00000084598 Gm10155-201 processed_pseudogene Mus_musculus 0 556
ENSMUST00000080279 Rpl21-ps14-201 processed_pseudogene Mus_musculus 0 556
ENSMUST00000095268 Gm9104-001 processed_pseudogene Mus_musculus 0 551
ENSMUST00000178657 Gm10045-001 processed_pseudogene Mus_musculus 0 551
ENSMUST00000122260 Gm13653-001 processed_pseudogene Mus_musculus 0 545
ENSMUST00000119897 Rpl21-ps9-001 processed_pseudogene Mus_musculus 0 545
ENSMUST00000093411 Gm8054-201 processed_pseudogene Mus_musculus 0 542
ENSMUST00000080330 Gm10916-201 processed_pseudogene Mus_musculus 0 540
ENSMUST00000077420 Rpl21-ps7-201 processed_pseudogene Mus_musculus 0 534
ENSMUST00000080223 Rpl21-ps3-201 processed_pseudogene Mus_musculus 0 534
ENSMUST00000180049 Gm6919-001 processed_pseudogene Mus_musculus 0 529
ENSMUST00000081668 Rpl21-ps12-201 processed_pseudogene Mus_musculus 0 529
ENSMUST00000072532 Rpl21-ps13-201 processed_pseudogene Mus_musculus 0 529
ENSMUST00000179660 Gm16416-201 processed_pseudogene Mus_musculus 0 523
ENSMUST00000117861 Gm12760-001 processed_pseudogene Mus_musculus 0 521
ENSMUST00000117491 Gm14336-001 processed_pseudogene Mus_musculus 0 521
ENSMUST00000117993 Gm13641-001 processed_pseudogene Mus_musculus 0 520
ENSMUST00000095940 Rpl21-ps5-201 processed_pseudogene Mus_musculus 0 518
ENSMUST00000077278 Rpl21-ps11-201 processed_pseudogene Mus_musculus 0 514
ENSMUST00000080097 Gm16415-001 processed_pseudogene Mus_musculus 0 512
ENSMUST00000121754 Gm12618-001 processed_pseudogene Mus_musculus 0 501
ENSMUST00000121800 Gm8880-001 processed_pseudogene Mus_musculus 0 497
ENSMUST00000130905 Gm6689-001 processed_pseudogene Mus_musculus 0 496
ENSMUST00000120348 Gm12123-001 processed_pseudogene Mus_musculus 0 492
ENSMUST00000074828 Rpl21-ps6-001 processed_pseudogene Mus_musculus 0 481
ENSMUST00000141391 Gm11281-001 processed_pseudogene Mus_musculus 0 468
ENSMUST00000079153 Gm8526-201 processed_pseudogene Mus_musculus 0 460
ENSMUST00000117320 Gm15578-001 unprocessed_pseudogene Mus_musculus 0 444
ENSMUST00000080061 Gm8724-201 processed_pseudogene Mus_musculus 0 440
ENSMUST00000080237 Rpl21-ps4-201 protein_coding Mus_musculus 0 387
ENSMUST00000034094 Gins3-201 protein_coding Mus_musculus 0 326
ENSMUST00000120458 Gm7071-001 processed_pseudogene Mus_musculus 0 289
ENSMUST00000117461 Gm14657-001 processed_pseudogene Mus_musculus 0 287
ENSMUST00000121644 Gm15309-001 processed_pseudogene Mus_musculus 0 270
ENSMUST00000118827 Gm15312-001 processed_pseudogene Mus_musculus 0 270
ENSMUST00000119382 Gm14106-001 processed_pseudogene Mus_musculus 0 257
ENSDART00000002595 rpl21-001 protein_coding Danio_rerio 0 257
ENSMUST00000185232 RP23-478I8.1-001 processed_pseudogene Mus_musculus 0 228
ENSMUST00000120018 Gm13518-001 processed_pseudogene Mus_musculus 0 219
ENSMUST00000119221 Gm12934-001 processed_pseudogene Mus_musculus 9.80909e-45 183
ENSMUST00000170118 Gm17113-001 processed_pseudogene Mus_musculus 4e-34 148

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