C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: contactin 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000484686 CNTN4-016 ENSG00000144619 9606 + 3:3039624-3057953 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonKidneyLiverMusclePlacentaENST00000484686
Transcript ID Colon Kidney Liver Muscle Placenta
ENST00000484686 0.904±0.00 0.030±0.00 0.421±0.30 0.095±0.00 0.497±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00050H CIL_00050H_0001 CGP 3:1092576-3057956
CIL_0007CD CIL_0007CD_0001 CGP 3:2098813-3126613

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113264 Cntn4-201 protein_coding Mus_musculus 0 2736
ENSMUST00000089208 Cntn4-001 protein_coding Mus_musculus 0 2736
ENSMUST00000132395 Cntn4-008 processed_transcript Mus_musculus 0 1472
ENSMUST00000142626 Cntn4-011 processed_transcript Mus_musculus 0 848
ENSMUST00000123596 Cntn4-010 retained_intron Mus_musculus 0 392

Loading