C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L35a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000485439 RPL35A-004 ENSG00000182899 9606 + 3:197950190-197954451 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungOvaryENST00000485439
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary
ENST00000485439 4.940±0.00 20.667±0.00 34.273±0.00 16.962±0.00 12.331±0.00 13.012±0.00 40.381±0.00 15.638±0.00 26.046±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006C8 CIL_0006C8_0001 CGP 3:197791226-197960142
CIL_0006C9 CIL_0006C9_0001 CGP 3:197889075-197960142
CIL_0006CA CIL_0006CA_0001 CGP 3:197949987-198043720

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000120385 Gm16200-001 processed_pseudogene Mus_musculus 0 388
ENSMUST00000161714 Gm16134-001 processed_pseudogene Mus_musculus 0 359
ENSMUST00000119839 Gm11483-001 processed_pseudogene Mus_musculus 0 267
ENSMUST00000184830 Gm20111-001 processed_pseudogene Mus_musculus 0 226

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