C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000485714 POMGNT1-004 ENSG00000085998 9606 - 1:46190117-46193800 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonLungENST00000485714
Transcript ID Colon Lung
ENST00000485714 1.055±0.00 0.731±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001N5 CIL_0001N5_0001 CGP 1:46188682-46221261

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000136855 Pomgnt1-008 retained_intron Mus_musculus 0 798
ENSMUST00000106494 Pomgnt1-003 protein_coding Mus_musculus 0 795
ENSMUST00000106496 Pomgnt1-002 protein_coding Mus_musculus 0 795
ENSMUST00000106498 Pomgnt1-001 protein_coding Mus_musculus 0 795
ENSMUST00000121052 Pomgnt1-010 protein_coding Mus_musculus 0 795
ENSMUST00000120083 Pomgnt1-011 protein_coding Mus_musculus 0 795
ENSMUST00000133838 Pomgnt1-005 retained_intron Mus_musculus 0 379
ENSMUST00000127426 Pomgnt1-006 retained_intron Mus_musculus 0 300
ENSMUST00000155718 Pomgnt1-007 processed_transcript Mus_musculus 0 276
ENSMUST00000147612 Pomgnt1-004 processed_transcript Mus_musculus 0 207
ENSMUST00000151325 Pomgnt1-012 retained_intron Mus_musculus 2e-23 115

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