C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L7 pseudogene 41
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000485823 RPL7P41-001 ENSG00000241146 9606 + 12:52885429-52886385 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000485823
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000485823 0.012±0.00 0.336±0.00 0.272±0.00 0.152±0.00 0.059±0.00 0.071±0.00 0.077±0.00 0.011±0.00 0.094±0.00 0.011±0.00 0.039±0.00 0.044±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00038V CIL_00038V_0001 CGP 12:52837804-52949954

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000058437 Rpl7-001 protein_coding Mus_musculus 0 490
ENSMUST00000119853 Gm12174-001 processed_pseudogene Mus_musculus 0 484
ENSMUST00000027054 Gm5045-201 processed_pseudogene Mus_musculus 0 473
ENSMUST00000118173 Gm6274-001 processed_pseudogene Mus_musculus 0 468
ENSMUST00000149566 Rpl7-003 protein_coding Mus_musculus 0 442
ENSMUST00000122189 Gm5392-001 processed_pseudogene Mus_musculus 0 407
ENSMUST00000118692 Gm12090-001 processed_pseudogene Mus_musculus 0 403
ENSMUST00000141217 Rpl7-002 retained_intron Mus_musculus 0 377
ENSMUST00000117062 Gm15159-001 processed_pseudogene Mus_musculus 0 315
ENSMUST00000151017 Rpl7-005 retained_intron Mus_musculus 0 219
ENSMUST00000140597 Rpl7-006 processed_transcript Mus_musculus 0 219

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