C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L34 pseudogene 33
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000486062 RPL34P33-001 ENSG00000241282 9606 + 19:22699352-22699685 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonKidneyLungMuscleOvaryTestisENST00000486062
Transcript ID Adipose Adrenal Brain Colon Kidney Lung Muscle Ovary Testis
ENST00000486062 0.265±0.00 0.311±0.00 0.093±0.00 0.042±0.00 0.221±0.00 0.557±0.00 0.120±0.00 0.385±0.00 0.204±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006CF CIL_0006CF_0004 CGP 19:22634324-22784107

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000177415 Gm4705-001 processed_pseudogene Mus_musculus 0 361
ENSMUST00000084445 Gm10154-001 processed_pseudogene Mus_musculus 0 355
ENSMUST00000121998 Rpl34-ps1-001 processed_pseudogene Mus_musculus 0 355
ENSMUST00000079085 Rpl34-002 protein_coding Mus_musculus 0 355
ENSMUST00000062601 Rpl34-001 protein_coding Mus_musculus 0 355
ENSMUST00000081679 Gm6404-201 processed_pseudogene Mus_musculus 0 350
ENSMUST00000136334 Gm10086-001 processed_pseudogene Mus_musculus 0 339
ENSMUST00000117957 Gm7857-001 processed_pseudogene Mus_musculus 0 309
ENSMUST00000135691 Rpl34-004 retained_intron Mus_musculus 0 283
ENSMUST00000133802 Rpl34-003 retained_intron Mus_musculus 0 250

Loading