C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: cilia and flagella associated protein 46
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000486104 CFAP46-006 ENSG00000171811 9606 - 10:132898517-132916682 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENST00000486104
Transcript ID Placenta
ENST00000486104 0.041±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W3 CIL_0008W3_0001 VISTA 10:132328525-132933308
CIL_0000BC CIL_0000BC_0001 CGP 10:132808392-133131675

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000156116 9330101J02Rik-004 retained_intron Mus_musculus 0 756
ENSMUST00000140820 9330101J02Rik-003 nonsense_mediated_decay Mus_musculus 0 750
ENSMUST00000129990 9330101J02Rik-001 protein_coding Mus_musculus 0 750
ENSMUST00000155075 9330101J02Rik-005 nonsense_mediated_decay Mus_musculus 0 250

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