C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000486212 MPP4-004 ENSG00000082126 9606 - 2:201665064-201698683 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartLiverLungMuscleOvaryPlacentaENST00000486212
Transcript ID Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta
ENST00000486212 0.026±0.00 0.022±0.00 0.072±0.05 0.108±0.00 0.044±0.00 0.083±0.00 0.072±0.00 0.038±0.00 0.067±0.05 0.022±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089O CIL_00089O_0001 VISTA 2:201132231-201734391
CIL_0009CR CIL_0009CR_0001 VISTA 2:201587932-202188948
CIL_00020O CIL_00020O_0001 CGP 2:201620184-201698694
CIL_0000JK CIL_0000JK_0002 CGP 2:201644870-201781189

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000066374 Mpp4-201 protein_coding Mus_musculus 0 516
ENSMUST00000189743 Mpp4-007 retained_intron Mus_musculus 0 516
ENSMUST00000114275 Mpp4-001 protein_coding Mus_musculus 0 516
ENSMUST00000078874 Mpp4-005 protein_coding Mus_musculus 0 516
ENSMUST00000191200 Mpp4-006 protein_coding Mus_musculus 0 516
ENSMUST00000187825 Mpp4-009 processed_transcript Mus_musculus 0 241
ENSMUST00000189884 Mpp4-004 retained_intron Mus_musculus 0 239
ENSMUST00000188494 Mpp4-003 retained_intron Mus_musculus 0 239
ENSMUST00000186477 Mpp4-008 protein_coding Mus_musculus 0 206
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.00000007 64
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.000003 58

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