C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: itchy E3 ubiquitin protein ligase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000486883 ITCH-003 ENSG00000078747 9606 + 20:34363241-34413879 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000486883
Transcript ID Muscle
ENST00000486883 2.714±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098F CIL_00098F_0001 VISTA 20:33968769-34569610
CIL_0003SW CIL_0003SW_0001 CGP 20:34280268-34511393
CIL_0005BA CIL_0005BA_0001 CGP 20:34363235-34540958

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029126 Itch-001 protein_coding Mus_musculus 0 761
ENSMUST00000138468 Itch-005 retained_intron Mus_musculus 0 745
ENSMUST00000142147 Itch-003 processed_transcript Mus_musculus 0 732
ENSMUST00000123497 Itch-004 retained_intron Mus_musculus 0 693
ENSMUST00000109685 Itch-002 protein_coding Mus_musculus 0 649
ENSMUST00000155360 Itch-006 retained_intron Mus_musculus 0 649
ENSMUST00000126648 Itch-007 retained_intron Mus_musculus 0 196

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