C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium channel, voltage-dependent, L type, alpha 1F subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000486943 CACNA1F-005 ENSG00000102001 9606 - X:49208816-49209712 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonHeartKidneyLungOvaryTestisENST00000486943
Transcript ID Adipose Adrenal Brain Colon Heart Kidney Lung Ovary Testis
ENST00000486943 0.179±0.00 0.404±0.00 0.238±0.00 0.156±0.00 0.080±0.00 0.084±0.00 0.136±0.00 0.080±0.00 0.175±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000141634 Cacna1f-004 retained_intron Mus_musculus 9e-37 158
ENSMUST00000115725 Cacna1f-002 protein_coding Mus_musculus 9e-37 158
ENSMUST00000115726 Cacna1f-001 protein_coding Mus_musculus 9e-37 158
ENSMUST00000155090 Cacna1f-003 nonsense_mediated_decay Mus_musculus 9e-37 158
ENSMUST00000151208 Cacna1f-011 retained_intron Mus_musculus 4e-20 102
ENSMUST00000105321 Nfic-001 protein_coding Mus_musculus 0.0000000004 69
ENSMUST00000091246 Flcn-005 protein_coding Mus_musculus 0.00000002 64
ENSMUST00000148151 Flcn-003 retained_intron Mus_musculus 0.00000002 64
ENSMUST00000102697 Flcn-004 protein_coding Mus_musculus 0.00000002 64

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