C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000487348 RP11-415K20.1-001 ENSG00000234397 9606 - 1:22322840-22323331 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLungMuscleOvaryTestisENST00000487348
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Lung Muscle Ovary Testis
ENST00000487348 0.061±0.00 0.065±0.00 0.208±0.00 0.066±0.00 0.029±0.00 0.065±0.00 0.062±0.00 0.084±0.00 0.069±0.00 0.030±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000175860 Gm6061-001 processed_pseudogene Mus_musculus 0 538
ENSMUST00000132846 Ppia-001 protein_coding Mus_musculus 0 532
ENSMUST00000075723 Gm10123-001 processed_pseudogene Mus_musculus 0 531
ENSMUST00000120318 Gm13493-001 processed_pseudogene Mus_musculus 0 527
ENSMUST00000077747 Gm9234-201 processed_pseudogene Mus_musculus 0 512
ENSMUST00000090749 Ppia-005 processed_transcript Mus_musculus 0 508
ENSMUST00000155824 Ppia-003 retained_intron Mus_musculus 0 503
ENSMUST00000178933 Gm5558-201 processed_pseudogene Mus_musculus 0 501
ENSMUST00000099961 Gm6043-201 processed_pseudogene Mus_musculus 0 501
ENSMUST00000119389 Gm14046-001 processed_pseudogene Mus_musculus 0 490
ENSMUST00000137829 Ppia-002 retained_intron Mus_musculus 0 464
ENSMUST00000177265 Gm5777-001 processed_pseudogene Mus_musculus 0 460
ENSMUST00000186816 RP23-215C21.3-001 processed_pseudogene Mus_musculus 0 427
ENSMUST00000172723 Gm5967-001 processed_pseudogene Mus_musculus 0 425
ENSMUST00000118678 Gm13679-001 processed_pseudogene Mus_musculus 0 425
ENSMUST00000120735 Gm5883-001 processed_pseudogene Mus_musculus 0 422
ENSMUST00000119751 Gm11469-001 processed_pseudogene Mus_musculus 0 409
ENSMUST00000121223 Gm12632-001 processed_pseudogene Mus_musculus 0 351
ENSMUST00000117298 Gm12842-001 processed_pseudogene Mus_musculus 0 350
ENSMUST00000121648 Gm6067-001 processed_pseudogene Mus_musculus 0 235
ENSMUST00000118166 Gm13454-001 processed_pseudogene Mus_musculus 0 207
ENSMUST00000069552 Gm5160-201 protein_coding Mus_musculus 6e-32 141

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