C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAD51 paralog B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000487861 RAD51B-001 ENSG00000182185 9606 + 14:67819779-68611565 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartLungPlacentaTestisENST00000487861
Transcript ID Brain Colon Heart Lung Placenta Testis
ENST00000487861 0.212±0.00 0.500±0.00 0.059±0.00 0.276±0.00 0.348±0.01 0.193±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002CJ CIL_0002CJ_0001 CGP 14:67727374-68730218
CIL_0001JV CIL_0001JV_0002 CGP 14:67819779-68796253

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003677 IEA DNA binding
GO:0003678 IEA DNA helicase activity
GO:0003697 IEA single-stranded DNA binding
GO:0005524 IEA ATP binding
GO:0006200 IEA ATP catabolic process
GO:0006259 IEA DNA metabolic process
GO:0006260 IEA DNA replication
GO:0006281 IEA DNA repair
GO:0008094 IEA DNA-dependent ATPase activity
GO:0009432 IEA SOS response

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000079533 Rad51b-201 protein_coding Mus_musculus 0 736
ENSMUST00000171210 Rad51b-202 protein_coding Mus_musculus 0 732

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