C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome 9 open reading frame 72
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000488117 C9orf72-002 ENSG00000147894 9606 - 9:27546555-27573448 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungOvaryENST00000488117
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Ovary
ENST00000488117 0.351±0.00 0.954±0.18 0.241±0.00 0.193±0.00 0.260±0.00 0.265±0.00 0.776±0.65 2.390±0.00 0.625±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00061J CIL_00061J_0001 CGP 9:27524314-27573866
CIL_00061K CIL_00061K_0001 CGP 9:27546545-28670286

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108127 3110043O21Rik-001 protein_coding Mus_musculus 0 1035
ENSMUST00000084724 3110043O21Rik-007 protein_coding Mus_musculus 0 1035
ENSMUST00000156472 3110043O21Rik-003 retained_intron Mus_musculus 0 918
ENSMUST00000108126 3110043O21Rik-002 protein_coding Mus_musculus 0 887
ENSMUST00000130538 3110043O21Rik-004 processed_transcript Mus_musculus 0 603
ENSMUST00000149138 3110043O21Rik-005 processed_transcript Mus_musculus 0 385

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