C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: vesicle transport through interaction with t-SNAREs 1A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000489357 VTI1A-007 ENSG00000151532 9606 + 10:112447349-112538301 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyMuscleOvaryPlacentaTestisENST00000489357
Transcript ID Brain Kidney Muscle Ovary Placenta Testis
ENST00000489357 7.389±0.00 3.013±0.00 1.674±0.00 8.490±0.00 7.403±0.00 14.212±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093P CIL_00093P_0001 VISTA 10:112343926-112944807
CIL_0006OV CIL_0006OV_0001 CGP 10:112430300-112818744
CIL_0006OU CIL_0006OU_0001 CGP 10:112446998-113167678

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000095950 Vti1a-201 protein_coding Mus_musculus 0 483
ENSDART00000154255 vti1a-201 protein_coding Danio_rerio 3e-39 165
ENSDART00000153172 vti1a-003 protein_coding Danio_rerio 3e-39 165
ENSDART00000066256 vti1a-001 protein_coding Danio_rerio 3e-39 165

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