C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: histone deacetylase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000490081 HDAC1-004 ENSG00000116478 9606 + 1:32327189-32331781 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleOvaryPlacentaTestisENST00000490081
Transcript ID Muscle Ovary Placenta Testis
ENST00000490081 1.767±0.00 122.909±0.00 26.115±0.00 26.767±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008AA CIL_0008AA_0001 VISTA 1:31744429-32345312

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000142984 Hdac1-005 retained_intron Mus_musculus 0 1092
ENSMUST00000102597 Hdac1-001 protein_coding Mus_musculus 0 865
ENSMUST00000079363 Gm10093-201 protein_coding Mus_musculus 0 859
ENSMUST00000125718 Hdac1-003 retained_intron Mus_musculus 0 508
ENSMUST00000116079 Gm7146-001 processed_pseudogene Mus_musculus 0 459
ENSMUST00000150105 Hdac1-004 retained_intron Mus_musculus 0 298

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