C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: cytochrome c oxidase subunit VIc pseudogene 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000490840 COX6CP6-001 ENSG00000240156 9606 + 3:70751123-70751350 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartENST00000490840
Transcript ID Brain Heart
ENST00000490840 0.187±0.00 0.055±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007L4 CIL_0007L4_0001 UCNEbase 3:70042617-71525233
CIL_0009A6 CIL_0009A6_0001 VISTA 3:70216091-70817701
CIL_00094D CIL_00094D_0001 VISTA 3:70352338-70953753
CIL_0009A7 CIL_0009A7_0001 VISTA 3:70522165-71123806
CIL_0008N6 CIL_0008N6_0001 VISTA 3:70677078-71277613
CIL_00096K CIL_00096K_0001 VISTA 3:70685238-71286279
CIL_0007PZ CIL_0007PZ_0001 VISTA 3:70703225-71304095
CIL_0008OZ CIL_0008OZ_0001 VISTA 3:70750006-71351700

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000153512 Cox6c-004 protein_coding Mus_musculus 0 189
ENSMUST00000014457 Cox6c-001 protein_coding Mus_musculus 0 189
ENSMUST00000149263 Gm6265-001 processed_pseudogene Mus_musculus 2.00386e-43 178
ENSMUST00000181423 Gm16399-001 processed_pseudogene Mus_musculus 2e-39 165
ENSMUST00000127999 Cox6c-002 retained_intron Mus_musculus 6e-34 147
ENSMUST00000120211 Gm11504-001 processed_pseudogene Mus_musculus 6e-24 113

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