C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spermatogenesis associated 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000490850 SPATA6-004 ENSG00000132122 9606 - 1:48305805-48402744 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartLiverLungMuscleTestisENST00000490850
Transcript ID Brain Colon Heart Liver Lung Muscle Testis
ENST00000490850 1.883±0.00 1.759±0.00 1.123±0.00 3.713±0.00 4.332±0.00 0.131±0.00 75.549±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000633 CIL_000633_0002 CGP 1:48295372-50023913

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038868 Spata6-001 protein_coding Mus_musculus 0 944
ENSMUST00000143879 Spata6-005 processed_transcript Mus_musculus 0 941
ENSMUST00000122820 Spata6-002 processed_transcript Mus_musculus 0 843
ENSMUST00000084354 Spata6-004 protein_coding Mus_musculus 0 782
ENSMUST00000149834 Spata6-014 processed_transcript Mus_musculus 0 712
ENSMUST00000134000 Spata6-013 processed_transcript Mus_musculus 0 396
ENSMUST00000125999 Spata6-010 processed_transcript Mus_musculus 0 390
ENSMUST00000137072 Spata6-011 processed_transcript Mus_musculus 0 220
ENSMUST00000132802 Spata6-012 processed_transcript Mus_musculus 2e-20 104

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