C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000491725 RP11-810P12.1-001 ENSG00000244176 9606 - 11:62011751-62012602 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastKidneyLiverLungMuscleOvaryTestisENST00000491725
Transcript ID Adipose Adrenal Breast Kidney Liver Lung Muscle Ovary Testis
ENST00000491725 0.023±0.00 0.024±0.00 0.051±0.00 0.221±0.00 0.084±0.00 0.023±0.00 0.061±0.00 0.045±0.01 0.022±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000170715 Rps2-201 protein_coding Mus_musculus 0 638
ENSMUST00000054289 Rps2-001 protein_coding Mus_musculus 0 638
ENSMUST00000118634 Gm6433-001 processed_pseudogene Mus_musculus 0 632
ENSMUST00000079261 Gm6139-001 processed_pseudogene Mus_musculus 0 627
ENSMUST00000170335 Rps2-ps10-002 processed_transcript Mus_musculus 0 621
ENSMUST00000118911 Gm11687-001 processed_pseudogene Mus_musculus 0 621
ENSMUST00000117295 Rps2-ps13-001 processed_pseudogene Mus_musculus 0 621
ENSMUST00000132939 Gm9013-001 processed_pseudogene Mus_musculus 0 621
ENSMUST00000076842 Rps2-ps10-001 transcribed_processed_pseudogene Mus_musculus 0 617
ENSMUST00000117071 Gm11249-001 processed_pseudogene Mus_musculus 0 617
ENSMUST00000085368 Gm5786-201 protein_coding Mus_musculus 0 610
ENSMUST00000186517 RP23-128A11.3-001 processed_pseudogene Mus_musculus 0 603
ENSMUST00000121713 Gm10420-001 processed_pseudogene Mus_musculus 0 599
ENSMUST00000118720 Gm11599-001 processed_pseudogene Mus_musculus 0 590
ENSMUST00000119653 Gm16148-001 processed_pseudogene Mus_musculus 0 590
ENSMUST00000146867 Rps2-002 protein_coding Mus_musculus 0 590
ENSMUST00000071458 Gm4968-001 processed_pseudogene Mus_musculus 0 588
ENSMUST00000169678 Gm6576-201 protein_coding Mus_musculus 0 588
ENSMUST00000120203 Gm12933-001 processed_pseudogene Mus_musculus 0 582
ENSMUST00000166546 Gm18025-201 protein_coding Mus_musculus 0 582
ENSMUST00000121722 Gm12366-001 processed_pseudogene Mus_musculus 0 580
ENSMUST00000177599 Gm5070-001 processed_pseudogene Mus_musculus 0 579
ENSMUST00000184266 Rps2-ps5-001 processed_pseudogene Mus_musculus 0 573
ENSMUST00000073790 Gm6311-201 pseudogene Mus_musculus 0 571
ENSMUST00000095471 Rps2-ps6-201 protein_coding Mus_musculus 0 568
ENSMUST00000122167 Gm16061-001 processed_pseudogene Mus_musculus 0 564
ENSMUST00000152407 Rps2-003 protein_coding Mus_musculus 0 540
ENSMUST00000146791 Gm12091-001 processed_pseudogene Mus_musculus 0 525
ENSMUST00000121420 Gm12176-001 processed_pseudogene Mus_musculus 0 523
ENSMUST00000121140 Gm12109-001 processed_pseudogene Mus_musculus 0 523
ENSMUST00000121414 Rps2-ps9-001 processed_pseudogene Mus_musculus 0 521
ENSMUST00000119247 Gm15653-001 processed_pseudogene Mus_musculus 0 518
ENSMUST00000139570 Gm10653-001 transcribed_processed_pseudogene Mus_musculus 0 473
ENSMUST00000156423 Gm10653-003 processed_transcript Mus_musculus 0 473
ENSMUST00000132250 Gm10653-002 processed_transcript Mus_musculus 0 473
ENSMUST00000120476 Gm13559-001 processed_pseudogene Mus_musculus 0 472
ENSMUST00000119217 Gm8302-001 processed_pseudogene Mus_musculus 0 457
ENSMUST00000120626 Gm12922-001 processed_pseudogene Mus_musculus 0 451
ENSMUST00000121811 Gm6881-001 processed_pseudogene Mus_musculus 0 429
ENSMUST00000159783 Gm8194-001 processed_pseudogene Mus_musculus 0 429
ENSDART00000110842 rps2-201 protein_coding Danio_rerio 0 427
ENSDART00000138107 rps2-001 protein_coding Danio_rerio 0 427
ENSMUST00000119578 Gm11643-001 processed_pseudogene Mus_musculus 0 425
ENSMUST00000122809 Rps2-004 retained_intron Mus_musculus 0 422
ENSMUST00000161130 Gm9550-001 processed_pseudogene Mus_musculus 0 414
ENSMUST00000129580 Rps2-005 retained_intron Mus_musculus 0 398
ENSMUST00000183369 Gm18014-001 processed_pseudogene Mus_musculus 0 355
ENSMUST00000121348 Gm7638-001 processed_pseudogene Mus_musculus 0 337
ENSMUST00000117941 Gm14276-001 processed_pseudogene Mus_musculus 0 292
ENSMUST00000116032 Gm16073-001 processed_pseudogene Mus_musculus 0 291
ENSMUST00000188013 RP24-467J24.1-001 processed_pseudogene Mus_musculus 0 274
ENSMUST00000116022 Gm15846-001 processed_pseudogene Mus_musculus 0 246
ENSMUST00000129984 Rps2-007 retained_intron Mus_musculus 0 220
ENSMUST00000132803 Rps2-006 retained_intron Mus_musculus 0 202
ENSDART00000141100 rps2-002 protein_coding Danio_rerio 4.00001e-41 172
ENSMUST00000159341 Gm16138-001 processed_pseudogene Mus_musculus 7e-29 132
ENSDART00000133878 rps2-003 retained_intron Danio_rerio 1e-21 108

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