C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000491837 RP11-79L9.2-001 ENSG00000174715 9606 - 3:138643874-138644694 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastKidneyLungOvaryPlacentaTestisENST00000491837
Transcript ID Adrenal Bladder Brain Breast Kidney Lung Ovary Placenta Testis
ENST00000491837 0.029±0.00 1.909±0.00 0.062±0.00 0.207±0.00 0.117±0.00 0.598±0.54 0.147±0.06 0.068±0.00 0.135±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000132846 Ppia-001 protein_coding Mus_musculus 0 588
ENSMUST00000075723 Gm10123-001 processed_pseudogene Mus_musculus 0 584
ENSMUST00000175860 Gm6061-001 processed_pseudogene Mus_musculus 0 579
ENSMUST00000090749 Ppia-005 processed_transcript Mus_musculus 0 575
ENSMUST00000077747 Gm9234-201 processed_pseudogene Mus_musculus 0 573
ENSMUST00000120318 Gm13493-001 processed_pseudogene Mus_musculus 0 568
ENSMUST00000099961 Gm6043-201 processed_pseudogene Mus_musculus 0 545
ENSMUST00000119740 Gm12728-001 translated_processed_pseudogene Mus_musculus 0 544
ENSMUST00000119389 Gm14046-001 processed_pseudogene Mus_musculus 0 534
ENSMUST00000155824 Ppia-003 retained_intron Mus_musculus 0 529
ENSMUST00000137829 Ppia-002 retained_intron Mus_musculus 0 494
ENSMUST00000177265 Gm5777-001 processed_pseudogene Mus_musculus 0 484
ENSMUST00000117621 Gm13750-001 processed_pseudogene Mus_musculus 0 475
ENSMUST00000120735 Gm5883-001 processed_pseudogene Mus_musculus 0 473
ENSMUST00000121819 Gm6044-001 processed_pseudogene Mus_musculus 0 446
ENSMUST00000186816 RP23-215C21.3-001 processed_pseudogene Mus_musculus 0 444
ENSMUST00000118678 Gm13679-001 processed_pseudogene Mus_musculus 0 440
ENSMUST00000172723 Gm5967-001 processed_pseudogene Mus_musculus 0 438
ENSMUST00000119751 Gm11469-001 processed_pseudogene Mus_musculus 0 435
ENSMUST00000121648 Gm6067-001 processed_pseudogene Mus_musculus 0 300

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