C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L17 pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000491913 RPL17P2-001 ENSG00000242135 9606 - 14:60212462-60212912 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalColonHeartTestisENST00000491913
Transcript ID Adipose Adrenal Colon Heart Testis
ENST00000491913 0.029±0.00 0.058±0.00 0.053±0.00 0.843±0.00 0.213±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00036H CIL_00036H_0002 CGP 14:60144120-60299087

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118924 Rpl17-ps8-001 processed_pseudogene Mus_musculus 0 422
ENSMUST00000121001 Rpl17-ps5-001 processed_pseudogene Mus_musculus 0 416
ENSMUST00000119383 Rpl17-ps10-001 processed_pseudogene Mus_musculus 0 411
ENSMUST00000079716 Rpl17-201 protein_coding Mus_musculus 0 411
ENSMUST00000085340 Gm10268-201 processed_pseudogene Mus_musculus 0 405
ENSMUST00000119541 Rpl17-ps9-001 processed_pseudogene Mus_musculus 0 399
ENSMUST00000120241 Rpl17-ps4-001 processed_pseudogene Mus_musculus 0 394
ENSMUST00000173076 Gm3617-001 processed_pseudogene Mus_musculus 0 394
ENSMUST00000164501 Gm17214-001 processed_pseudogene Mus_musculus 0 387
ENSMUST00000189856 RP23-110B5.4-001 processed_pseudogene Mus_musculus 0 368
ENSMUST00000119156 Rpl17-ps1-001 processed_pseudogene Mus_musculus 0 364
ENSMUST00000185778 RP24-178O17.1-001 processed_pseudogene Mus_musculus 0 363
ENSMUST00000139696 Gm8062-001 processed_pseudogene Mus_musculus 0 351
ENSMUST00000121305 Gm11472-001 processed_pseudogene Mus_musculus 0 339
ENSMUST00000185744 RP23-304F24.3-001 processed_pseudogene Mus_musculus 0 337
ENSMUST00000119012 Gm12380-001 processed_pseudogene Mus_musculus 0 329
ENSMUST00000119137 Gm15497-001 processed_pseudogene Mus_musculus 0 324
ENSMUST00000146593 Gm15843-001 processed_pseudogene Mus_musculus 0 305
ENSMUST00000120830 Gm13665-001 processed_pseudogene Mus_musculus 0 302
ENSMUST00000121672 Gm11363-001 processed_pseudogene Mus_musculus 0 274
ENSMUST00000117144 Gm6429-001 processed_pseudogene Mus_musculus 0 250

Loading