C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: upstream binding protein 1 (LBP-1a)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000492136 UBP1-004 ENSG00000153560 9606 - 3:33388338-33398438 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartLiverOvaryTestisENST00000492136
Transcript ID Adrenal Bladder Brain Breast Colon Heart Liver Ovary Testis
ENST00000492136 1.119±0.00 0.746±0.00 0.655±0.13 2.169±0.00 1.619±0.00 0.368±0.00 0.791±0.00 0.992±0.27 2.201±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001TS CIL_0001TS_0002 CGP 3:33150042-33403662

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000116492 Ubp1-203 protein_coding Mus_musculus 0 316
ENSMUST00000009885 Ubp1-201 protein_coding Mus_musculus 0 316
ENSMUST00000084885 Ubp1-202 protein_coding Mus_musculus 0 316
ENSMUST00000035090 Fbxl2-001 protein_coding Mus_musculus 0 257

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