C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000492365 KB-1683C8.1-001 ENSG00000213750 9606 - 8:97624203-97625079 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000492365
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000492365 0.693±0.00 0.464±0.00 0.102±0.00 0.193±0.00 0.628±0.00 0.053±0.00 0.092±0.00 0.263±0.00 0.266±0.00 0.250±0.00 0.064±0.00 0.058±0.00 0.224±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001L2 CIL_0001L2_0001 CGP 8:97273474-97728770

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000170335 Rps2-ps10-002 processed_transcript Mus_musculus 0 769
ENSMUST00000117295 Rps2-ps13-001 processed_pseudogene Mus_musculus 0 769
ENSMUST00000170715 Rps2-201 protein_coding Mus_musculus 0 769
ENSMUST00000054289 Rps2-001 protein_coding Mus_musculus 0 769
ENSMUST00000076842 Rps2-ps10-001 transcribed_processed_pseudogene Mus_musculus 0 763
ENSMUST00000117071 Gm11249-001 processed_pseudogene Mus_musculus 0 760
ENSMUST00000132939 Gm9013-001 processed_pseudogene Mus_musculus 0 760
ENSMUST00000079261 Gm6139-001 processed_pseudogene Mus_musculus 0 758
ENSMUST00000118911 Gm11687-001 processed_pseudogene Mus_musculus 0 752
ENSMUST00000085368 Gm5786-201 protein_coding Mus_musculus 0 741
ENSMUST00000121713 Gm10420-001 processed_pseudogene Mus_musculus 0 739
ENSMUST00000169678 Gm6576-201 protein_coding Mus_musculus 0 739
ENSMUST00000121722 Gm12366-001 processed_pseudogene Mus_musculus 0 737
ENSMUST00000186517 RP23-128A11.3-001 processed_pseudogene Mus_musculus 0 732
ENSMUST00000075898 Gm5921-001 processed_pseudogene Mus_musculus 0 730
ENSMUST00000095471 Rps2-ps6-201 protein_coding Mus_musculus 0 730
ENSMUST00000184266 Rps2-ps5-001 processed_pseudogene Mus_musculus 0 723
ENSMUST00000071458 Gm4968-001 processed_pseudogene Mus_musculus 0 719
ENSMUST00000120203 Gm12933-001 processed_pseudogene Mus_musculus 0 719
ENSMUST00000177599 Gm5070-001 processed_pseudogene Mus_musculus 0 715
ENSMUST00000146867 Rps2-002 protein_coding Mus_musculus 0 715
ENSMUST00000118720 Gm11599-001 processed_pseudogene Mus_musculus 0 713
ENSMUST00000166546 Gm18025-201 protein_coding Mus_musculus 0 712
ENSMUST00000073790 Gm6311-201 pseudogene Mus_musculus 0 701
ENSMUST00000118634 Gm6433-001 processed_pseudogene Mus_musculus 0 686
ENSMUST00000152407 Rps2-003 protein_coding Mus_musculus 0 680
ENSMUST00000146791 Gm12091-001 processed_pseudogene Mus_musculus 0 678
ENSMUST00000119653 Gm16148-001 processed_pseudogene Mus_musculus 0 658
ENSMUST00000121420 Gm12176-001 processed_pseudogene Mus_musculus 0 636
ENSMUST00000121140 Gm12109-001 processed_pseudogene Mus_musculus 0 628
ENSMUST00000139570 Gm10653-001 transcribed_processed_pseudogene Mus_musculus 0 619
ENSMUST00000156423 Gm10653-003 processed_transcript Mus_musculus 0 619
ENSMUST00000132250 Gm10653-002 processed_transcript Mus_musculus 0 619
ENSMUST00000122167 Gm16061-001 processed_pseudogene Mus_musculus 0 612
ENSMUST00000117512 Gm7222-001 processed_pseudogene Mus_musculus 0 604
ENSMUST00000120626 Gm12922-001 processed_pseudogene Mus_musculus 0 597
ENSMUST00000119247 Gm15653-001 processed_pseudogene Mus_musculus 0 571
ENSMUST00000120476 Gm13559-001 processed_pseudogene Mus_musculus 0 566
ENSMUST00000119217 Gm8302-001 processed_pseudogene Mus_musculus 0 562
ENSMUST00000129580 Rps2-005 retained_intron Mus_musculus 0 529
ENSMUST00000121811 Gm6881-001 processed_pseudogene Mus_musculus 0 514
ENSDART00000110842 rps2-201 protein_coding Danio_rerio 0 488
ENSDART00000138107 rps2-001 protein_coding Danio_rerio 0 488
ENSMUST00000120110 Gm13204-001 processed_pseudogene Mus_musculus 0 473
ENSMUST00000121348 Gm7638-001 processed_pseudogene Mus_musculus 0 460
ENSMUST00000117941 Gm14276-001 processed_pseudogene Mus_musculus 0 449
ENSMUST00000117930 Gm13094-001 processed_pseudogene Mus_musculus 0 424
ENSMUST00000165577 Gm17150-001 processed_pseudogene Mus_musculus 0 377
ENSMUST00000187136 RP23-258M15.4-001 processed_pseudogene Mus_musculus 0 331
ENSMUST00000188013 RP24-467J24.1-001 processed_pseudogene Mus_musculus 0 300
ENSMUST00000122465 Gm12152-001 processed_pseudogene Mus_musculus 0 278
ENSMUST00000118606 Gm3943-001 processed_pseudogene Mus_musculus 0 263
ENSMUST00000119441 Gm13818-001 processed_pseudogene Mus_musculus 0 241
ENSMUST00000132803 Rps2-006 retained_intron Mus_musculus 0 233
ENSMUST00000119396 Gm12959-001 processed_pseudogene Mus_musculus 4.00001e-41 172
ENSMUST00000159341 Gm16138-001 processed_pseudogene Mus_musculus 2e-34 150
ENSDART00000141100 rps2-002 protein_coding Danio_rerio 2e-29 134
ENSMUST00000173358 Gm20396-001 processed_pseudogene Mus_musculus 0.000000000000006 86
ENSDART00000133878 rps2-003 retained_intron Danio_rerio 0.0000000002 71

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