C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: COP9 signalosome subunit 7B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000492423 COPS7B-013 ENSG00000144524 9606 + 2:231786445-231789149 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonOvaryENST00000492423
Transcript ID Breast Colon Ovary
ENST00000492423 2.238±0.00 2.122±0.00 3.057±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000899 CIL_000899_0001 VISTA 2:231361987-231963495
CIL_0007WD CIL_0007WD_0001 VISTA 2:231362545-231967398
CIL_0007FM CIL_0007FM_0001 CGP 2:231706895-231786272
CIL_0007FL CIL_0007FL_0001 CGP 2:231732425-231809254
CIL_0007FO CIL_0007FO_0001 CGP 2:231781671-231926403

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027446 Cops7b-201 protein_coding Mus_musculus 0 320
ENSMUST00000122884 Cops7b-002 nonsense_mediated_decay Mus_musculus 0 320
ENSMUST00000138280 Cops7b-003 nonsense_mediated_decay Mus_musculus 0 320
ENSMUST00000121534 Cops7b-001 protein_coding Mus_musculus 0 320
ENSMUST00000149542 Cops7b-005 protein_coding Mus_musculus 2.00386e-43 180

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