C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: succinate-CoA ligase, GDP-forming, beta subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000493112 SUCLG2-002 ENSG00000172340 9606 - 3:67360460-67654610 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyLiverLungENST00000493112
Transcript ID Brain Kidney Liver Lung
ENST00000493112 1.806±0.00 15.085±0.00 4.934±0.00 3.330±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001TI CIL_0001TI_0002 CGP 3:66998307-67654614
CIL_0001TH CIL_0001TH_0002 CGP 3:67360460-68545625

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004776 NAS succinate-CoA ligase (GDP-forming) activity
GO:0005524 IEA ATP binding
GO:0005525 IEA GTP binding
GO:0005739 IDA mitochondrion
GO:0005759 TAS mitochondrial matrix
GO:0005886 IDA plasma membrane
GO:0006099 IEA tricarboxylic acid cycle
GO:0006104 NAS succinyl-CoA metabolic process
GO:0006105 IEA succinate metabolic process
GO:0008152 IEA metabolic process
GO:0019003 IEA GDP binding
GO:0043234 IEA protein complex
GO:0044237 TAS cellular metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0045244 IEA succinate-CoA ligase complex (GDP-forming)
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000079847 Suclg2-201 protein_coding Mus_musculus 0 1432
ENSMUST00000120749 Gm15163-001 processed_pseudogene Mus_musculus 0 1382

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