C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: vascular endothelial growth factor A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000493786 VEGFA-010 ENSG00000112715 9606 + 6:43778172-43784564 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonENST00000493786
Transcript ID Colon
ENST00000493786 9.841±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YI CIL_0008YI_0001 VISTA 6:43493027-44094540

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000133605 Vegfa-004 retained_intron Mus_musculus 0 712
ENSMUST00000142321 Vegfa-005 retained_intron Mus_musculus 0 451
ENSMUST00000150327 Vegfa-007 retained_intron Mus_musculus 0 451
ENSMUST00000071648 Vegfa-001 protein_coding Mus_musculus 0 414
ENSMUST00000113520 Vegfa-010 protein_coding Mus_musculus 0 261
ENSMUST00000143985 Vegfa-006 retained_intron Mus_musculus 0 261
ENSMUST00000142351 Vegfa-003 protein_coding Mus_musculus 0 261
ENSMUST00000167860 Vegfa-201 protein_coding Mus_musculus 9e-36 154
ENSMUST00000113519 Vegfa-009 protein_coding Mus_musculus 9e-36 154
ENSMUST00000024747 Vegfa-008 protein_coding Mus_musculus 9e-36 154

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