C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000493866 NDUFB5-002 ENSG00000136521 9606 + 3:179604791-179627647 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryENST00000493866
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary
ENST00000493866 1.668±0.00 1.787±0.00 0.825±0.00 7.700±0.00 2.405±1.37 0.544±0.00 3.134±0.57 1.760±0.00 1.089±0.00 0.722±0.00 1.634±0.00 0.865±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00049U CIL_00049U_0002 CGP 3:179588285-179627647
CIL_00049V CIL_00049V_0002 CGP 3:179604690-179789401

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005739 IDA mitochondrion
GO:0005743 TAS mitochondrial inner membrane
GO:0005747 IDA mitochondrial respiratory chain complex I
GO:0006120 NAS mitochondrial electron transport, NADH to ubiquinone
GO:0008137 NAS NADH dehydrogenase (ubiquinone) activity
GO:0016021 IEA integral component of membrane
GO:0022904 TAS respiratory electron transport chain
GO:0044237 TAS cellular metabolic process
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.000006 58
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.00002 57
ENSMUST00000116286 Stk40-201 protein_coding Mus_musculus 0.00007 55
ENSMUST00000127092 Stk40-002 processed_transcript Mus_musculus 0.00007 55
ENSMUST00000049793 Duxbl1-001 protein_coding Mus_musculus 0.0003 53
ENSMUST00000100810 Duxbl2-001 protein_coding Mus_musculus 0.0003 53
ENSMUST00000100804 Duxbl3-001 protein_coding Mus_musculus 0.0003 53

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