C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: suppressor of cancer cell invasion
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000494102 SCAI-007 ENSG00000173611 9606 - 9:124971258-124976186 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002C7 CIL_0002C7_0002 CGP 9:124862130-124948492
CIL_00075F CIL_00075F_0001 CGP 9:124878357-125143506
CIL_00075C CIL_00075C_0001 CGP 9:124942608-125189939

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003714 IEA transcription corepressor activity
GO:0006351 IEA transcription, DNA-templated
GO:2001141 IEA regulation of RNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000147433 Scai-002 nonsense_mediated_decay Mus_musculus 0 444
ENSMUST00000038874 Scai-001 protein_coding Mus_musculus 0 425

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