C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hyaluronan and proteoglycan link protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000494218 HAPLN2-005 ENSG00000132702 9606 + 1:156624064-156625535 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000494218
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000494218 0.440±0.00 1.985±0.00 42.113±0.00 0.063±0.00 0.635±0.00 1.023±0.00 1.016±0.00 0.157±0.00 0.348±0.00 0.764±0.00 0.298±0.14 0.665±0.55 1.491±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008JO CIL_0008JO_0001 VISTA 1:156202708-156805613
CIL_000850 CIL_000850_0001 VISTA 1:156360457-156965492
CIL_0000CX CIL_0000CX_0002 CGP 1:156619294-156659532

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000005014 Hapln2-001 protein_coding Mus_musculus 0 689
ENSMUST00000160737 Hapln2-002 retained_intron Mus_musculus 0 689
ENSMUST00000162352 Hapln2-004 retained_intron Mus_musculus 0 597
ENSMUST00000160150 Hapln2-003 nonsense_mediated_decay Mus_musculus 1e-32 145

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