C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB, member of RAS oncogene family-like 2A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000494909 RABL2A-017 ENSG00000144134 9606 + 2:113640020-113643389 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000494909
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000494909 0.208±0.00 0.664±0.00 0.724±0.15 0.453±0.00 0.269±0.03 0.149±0.00 0.676±0.00 0.665±0.00 0.131±0.00 1.112±0.18 0.274±0.00 2.215±1.22

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000172074 Rabl2-011 retained_intron Mus_musculus 0 220
ENSMUST00000170126 Rabl2-009 nonsense_mediated_decay Mus_musculus 0 213
ENSMUST00000171580 Rabl2-008 nonsense_mediated_decay Mus_musculus 0 213
ENSMUST00000165747 Rabl2-004 retained_intron Mus_musculus 0 213
ENSMUST00000171826 Rabl2-005 protein_coding Mus_musculus 3e-27 128
ENSMUST00000172053 Rabl2-006 nonsense_mediated_decay Mus_musculus 3e-27 128
ENSMUST00000094056 Rabl2-002 protein_coding Mus_musculus 3e-27 128
ENSMUST00000023294 Rabl2-001 protein_coding Mus_musculus 3e-27 128
ENSMUST00000169466 Rabl2-010 nonsense_mediated_decay Mus_musculus 1e-26 126

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