C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | chromobox homolog 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000495350  |
CBX1-005 |
ENSG00000108468 |
9606 | - |
17:48074926-48101287  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007RQ | CIL_0007RQ_0001 | VISTA | 17:47700006-48306250 |
| CIL_0007WA | CIL_0007WA_0001 | VISTA | 17:47751636-48352675 |
| CIL_00097B | CIL_00097B_0001 | VISTA | 17:47849190-48450331 |
| CIL_0004MY | CIL_0004MY_0002 | CGP | 17:48048329-48101521 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005634 | IEA | nucleus |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000134585
|
Cbx1-003 | nonsense_mediated_decay | Mus_musculus | 0 | 760 |
|
ENSMUST00000018810
|
Cbx1-005 | protein_coding | Mus_musculus | 0 | 760 |
|
ENSMUST00000079702
|
Cbx1-002 | protein_coding | Mus_musculus | 0 | 695 |
|
ENSMUST00000093943
|
Cbx1-001 | protein_coding | Mus_musculus | 0 | 693 |
|
ENSMUST00000118932
|
Gm15211-001 | processed_pseudogene | Mus_musculus | 0 | 300 |
|
ENSMUST00000141257
|
Cbx1-004 | retained_intron | Mus_musculus | 0 | 259 |
