C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DGCR8 microprocessor complex subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000495826 DGCR8-002 ENSG00000128191 9606 + 22:20085820-20111872 retained_intron

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonLungENST00000495826
Transcript ID Bladder Colon Lung
ENST00000495826 1.006±0.00 1.709±0.00 1.032±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00095F CIL_00095F_0001 VISTA 22:19497462-20100487
CIL_0003KS CIL_0003KS_0002 CGP 22:20080232-20117392

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000185053 DGCR8-002 protein_coding Mus_musculus 0 1908
ENSMUST00000184916 DGCR8-001 protein_coding Mus_musculus 0 1908
ENSMUST00000115633 Dgcr8-002 protein_coding Mus_musculus 0 1908
ENSMUST00000009321 Dgcr8-001 protein_coding Mus_musculus 0 1908
ENSMUST00000183411 DGCR8-003 retained_intron Mus_musculus 0 1312
ENSMUST00000128856 Dgcr8-003 retained_intron Mus_musculus 0 1312
ENSMUST00000184628 DGCR8-005 processed_transcript Mus_musculus 0 599
ENSMUST00000152033 Dgcr8-005 processed_transcript Mus_musculus 0 599
ENSMUST00000185133 DGCR8-004 retained_intron Mus_musculus 0 429
ENSMUST00000156274 Dgcr8-004 retained_intron Mus_musculus 0 429
ENSDART00000051554 dgcr8-201 protein_coding Danio_rerio 6e-21 108
ENSDART00000124915 dgcr8-202 protein_coding Danio_rerio 6e-21 108
ENSDART00000144560 dgcr8-001 protein_coding Danio_rerio 6e-21 108

Loading