C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: COP9 signalosome subunit 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000496358 COPS6-009 ENSG00000168090 9606 + 7:100088993-100090780 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartKidneyMuscleOvaryPlacentaTestisENST00000496358
Transcript ID Bladder Brain Heart Kidney Muscle Ovary Placenta Testis
ENST00000496358 2.322±0.00 4.957±0.00 1.405±0.00 3.122±0.00 7.333±0.00 32.409±26.73 49.345±0.00 20.691±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QI CIL_0008QI_0001 VISTA 7:99696610-100298804
CIL_0002GB CIL_0002GB_0001 CGP 7:100064033-100092200
CIL_0003E2 CIL_0003E2_0001 CGP 7:100088954-100101940

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000019638 Cops6-001 protein_coding Mus_musculus 0 702
ENSMUST00000110951 Cops6-002 protein_coding Mus_musculus 0 699
ENSMUST00000154867 Cops6-003 retained_intron Mus_musculus 0 662
ENSMUST00000127881 Cops6-004 retained_intron Mus_musculus 0 455

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