C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: castor zinc finger 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000496432 CASZ1-007 ENSG00000130940 9606 - 1:10652984-10694479 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyLiverLungOvaryPlacentaENST00000496432
Transcript ID Brain Kidney Liver Lung Ovary Placenta
ENST00000496432 0.020±0.00 0.111±0.00 1.365±0.00 1.574±0.24 0.975±0.00 0.458±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008IM CIL_0008IM_0001 VISTA 1:10233066-10834152
CIL_0007WE CIL_0007WE_0001 VISTA 1:10372013-10973061
CIL_00085P CIL_00085P_0001 VISTA 1:10397607-10998574
CIL_00082Y CIL_00082Y_0001 VISTA 1:10421182-11021687
CIL_0008S2 CIL_0008S2_0001 VISTA 1:10435049-11039184
CIL_00019R CIL_00019R_0002 CGP 1:10472288-10796650
CIL_0008RU CIL_0008RU_0001 VISTA 1:10491513-11092116
CIL_0007N5 CIL_0007N5_0001 UCNEbase 1:10513883-10905812
CIL_0008JG CIL_0008JG_0001 VISTA 1:10565145-11165671
CIL_0008JY CIL_0008JY_0001 VISTA 1:10605072-11206087
CIL_00019Q CIL_00019Q_0002 CGP 1:10636604-10982037

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000122222 Casz1-004 protein_coding Mus_musculus 0 3192
ENSMUST00000094464 Casz1-001 protein_coding Mus_musculus 0 3192
ENSMUST00000139806 Casz1-006 protein_coding Mus_musculus 0 2350
ENSMUST00000147270 Casz1-003 protein_coding Mus_musculus 0 968
ENSDART00000002812 casz1-201 protein_coding Danio_rerio 0 828
ENSDART00000148257 casz1-001 protein_coding Danio_rerio 0 828

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