C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TRAF2 and NCK interacting kinase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000496492 TNIK-010 ENSG00000154310 9606 - 3:171063261-171102072 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartLiverLungTestisENST00000496492
Transcript ID Breast Colon Heart Liver Lung Testis
ENST00000496492 1.403±0.00 2.187±0.00 0.991±0.00 1.520±0.00 2.738±0.00 2.926±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008FL CIL_0008FL_0001 VISTA 3:170981727-171585717
CIL_00080K CIL_00080K_0001 VISTA 3:170993261-171598174
CIL_0007SJ CIL_0007SJ_0001 VISTA 3:171005102-171609864
CIL_00049S CIL_00049S_0002 CGP 3:171061339-171810950

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000159236 Tnik-001 protein_coding Mus_musculus 0 2782
ENSMUST00000160934 Tnik-003 nonsense_mediated_decay Mus_musculus 0 2782
ENSMUST00000160307 Tnik-007 protein_coding Mus_musculus 0 2538
ENSMUST00000159680 Tnik-010 protein_coding Mus_musculus 0 2534
ENSMUST00000159308 Tnik-011 protein_coding Mus_musculus 0 2270
ENSMUST00000162485 Tnik-009 protein_coding Mus_musculus 0 2270
ENSMUST00000160518 Tnik-008 protein_coding Mus_musculus 0 2270
ENSMUST00000161964 Tnik-014 protein_coding Mus_musculus 0 2266
ENSMUST00000162777 Tnik-013 protein_coding Mus_musculus 0 2266
ENSMUST00000162037 Tnik-016 retained_intron Mus_musculus 0 2117
ENSMUST00000159733 Tnik-006 retained_intron Mus_musculus 0 1166

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