C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000497035 RPS8-002 ENSG00000142937 9606 + 1:44775251-44778087 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonLiverLungMuscleOvaryPlacentaTestisENST00000497035
Transcript ID Adipose Adrenal Brain Breast Colon Liver Lung Muscle Ovary Placenta Testis
ENST00000497035 170.402±0.00 294.141±0.00 100.797±0.00 186.343±0.00 342.121±0.00 79.408±0.00 445.676±0.00 201.218±0.00 366.789±175.34 205.010±0.00 213.103±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093U CIL_00093U_0001 VISTA 1:44224152-44825477
CIL_000638 CIL_000638_0002 CGP 1:44775251-44787705

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102696 Rps8-001 protein_coding Mus_musculus 0 643
ENSMUST00000140687 Gm15501-001 transcribed_processed_pseudogene Mus_musculus 0 638
ENSMUST00000133910 Gm15501-002 processed_transcript Mus_musculus 0 638
ENSMUST00000180940 Gm11353-001 processed_pseudogene Mus_musculus 0 632
ENSMUST00000122418 Gm14323-001 processed_pseudogene Mus_musculus 0 621
ENSMUST00000118709 Rps8-ps2-001 processed_pseudogene Mus_musculus 0 616
ENSMUST00000121572 Gm14438-001 processed_pseudogene Mus_musculus 0 616
ENSMUST00000118252 Gm5687-001 processed_pseudogene Mus_musculus 0 588
ENSMUST00000085711 Gm5121-201 processed_pseudogene Mus_musculus 0 588
ENSMUST00000172445 Rps8-ps1-201 processed_pseudogene Mus_musculus 0 586
ENSMUST00000120833 Gm14414-001 processed_pseudogene Mus_musculus 0 562
ENSMUST00000186115 RP23-393D20.3-001 processed_pseudogene Mus_musculus 0 540
ENSMUST00000144051 Rps8-007 retained_intron Mus_musculus 0 508
ENSMUST00000189312 RP24-160J12.4-001 processed_pseudogene Mus_musculus 0 372
ENSMUST00000140226 Rps8-002 retained_intron Mus_musculus 0 370
ENSMUST00000127037 Rps8-004 retained_intron Mus_musculus 0 337
ENSMUST00000141219 Rps8-006 retained_intron Mus_musculus 0 259

Loading