C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000497325 CTD-2270N23.1-001 ENSG00000213862 9606 - 15:47730144-47730935 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000497325
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000497325 0.302±0.00 0.164±0.00 0.061±0.00 0.134±0.00 0.089±0.00 0.089±0.01 0.026±0.00 0.116±0.00 0.154±0.00 0.173±0.00 0.170±0.00 0.235±0.07 0.105±0.05 0.171±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004NB CIL_0004NB_0001 CGP 15:47184101-48142672
CIL_0008UD CIL_0008UD_0001 VISTA 15:47420599-48024055

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000085365 Gm16477-001 processed_pseudogene Mus_musculus 0 876
ENSMUST00000118791 Rpl7a-ps11-001 processed_pseudogene Mus_musculus 0 870
ENSMUST00000190511 RP23-58N8.1-001 processed_pseudogene Mus_musculus 0 870
ENSMUST00000102898 Rpl7a-001 protein_coding Mus_musculus 0 859
ENSMUST00000190579 Rpl7a-ps10-001 processed_pseudogene Mus_musculus 0 843
ENSMUST00000090170 Rpl7a-ps3-201 protein_coding Mus_musculus 0 843
ENSMUST00000183380 Gm17828-001 processed_pseudogene Mus_musculus 0 828
ENSMUST00000094754 Rpl7a-ps8-201 protein_coding Mus_musculus 0 821
ENSMUST00000095218 Rpl7a-ps5-201 protein_coding Mus_musculus 0 815
ENSMUST00000071172 RP23-58N8.4-001 processed_pseudogene Mus_musculus 0 811
ENSMUST00000145247 Gm6286-001 processed_pseudogene Mus_musculus 0 809
ENSMUST00000096427 Gm17415-001 processed_pseudogene Mus_musculus 0 804
ENSMUST00000191231 RP24-217I2.2-001 processed_pseudogene Mus_musculus 0 795
ENSMUST00000119745 Gm13864-001 processed_pseudogene Mus_musculus 0 784
ENSMUST00000162120 Gm7418-001 processed_pseudogene Mus_musculus 0 773
ENSMUST00000120384 Rpl7a-ps12-001 processed_pseudogene Mus_musculus 0 747
ENSMUST00000120032 Gm13666-001 processed_pseudogene Mus_musculus 0 730
ENSMUST00000171235 Gm5459-001 processed_pseudogene Mus_musculus 0 726
ENSMUST00000117398 Gm8250-001 processed_pseudogene Mus_musculus 0 723
ENSMUST00000151645 Gm7847-001 processed_pseudogene Mus_musculus 0 717
ENSMUST00000122355 Gm11760-001 processed_pseudogene Mus_musculus 0 708
ENSMUST00000136269 Rpl7a-002 processed_transcript Mus_musculus 0 695
ENSMUST00000120504 Gm12124-001 processed_pseudogene Mus_musculus 0 649
ENSMUST00000120236 Gm14141-001 processed_pseudogene Mus_musculus 0 643
ENSMUST00000118749 Gm4909-001 processed_pseudogene Mus_musculus 0 643
ENSMUST00000139800 Gm5353-001 processed_pseudogene Mus_musculus 0 638
ENSMUST00000137376 Rpl7a-004 processed_transcript Mus_musculus 0 638
ENSMUST00000118291 Gm16166-001 processed_pseudogene Mus_musculus 0 616
ENSMUST00000118838 Gm11362-001 processed_pseudogene Mus_musculus 0 556
ENSMUST00000120981 Gm12593-001 processed_pseudogene Mus_musculus 0 479
ENSMUST00000143678 Rpl7a-003 processed_transcript Mus_musculus 0 435
ENSMUST00000117289 Gm16394-001 processed_pseudogene Mus_musculus 0 300
ENSMUST00000166414 Gm17097-001 processed_pseudogene Mus_musculus 6e-39 165
ENSMUST00000119982 Gm15007-001 processed_pseudogene Mus_musculus 0.00000000000006 82

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