C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 4 (anion exchanger), member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000497589 SLC4A3-003 ENSG00000114923 9606 + 2:219628516-219632418 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000497589
Transcript ID Muscle
ENST00000497589 0.064±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000916 CIL_000916_0001 VISTA 2:219106772-219707284
CIL_00082R CIL_00082R_0001 VISTA 2:219549147-220152579
CIL_0006O3 CIL_0006O3_0001 CGP 2:219597860-219641980
CIL_0008ED CIL_0008ED_0001 VISTA 2:219606364-220208558
CIL_0006O4 CIL_0006O4_0001 CGP 2:219627327-221574202

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000142257 Slc4a3-008 retained_intron Mus_musculus 0 383
ENSMUST00000154101 Slc4a3-007 protein_coding Mus_musculus 0 383
ENSMUST00000132612 Slc4a3-002 retained_intron Mus_musculus 0 383
ENSMUST00000027415 Slc4a3-010 nonsense_mediated_decay Mus_musculus 0 383
ENSMUST00000124341 Slc4a3-001 protein_coding Mus_musculus 0 383
ENSMUST00000145258 Slc4a3-012 nonsense_mediated_decay Mus_musculus 0 298
ENSMUST00000189794 Slc4a3-013 retained_intron Mus_musculus 0 243
ENSMUST00000145516 Slc4a3-003 retained_intron Mus_musculus 0 243
ENSMUST00000129703 Slc4a3-006 retained_intron Mus_musculus 0 226
ENSMUST00000150142 Slc4a3-004 protein_coding Mus_musculus 3e-32 143
ENSMUST00000138814 Slc4a3-005 protein_coding Mus_musculus 2e-23 113

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