C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DGCR8 microprocessor complex subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000498171 DGCR8-004 ENSG00000128191 9606 + 22:20087036-20111877 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartMuscleENST00000498171
Transcript ID Heart Muscle
ENST00000498171 1.007±0.44 0.475±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00095F CIL_00095F_0001 VISTA 22:19497462-20100487
CIL_0003KS CIL_0003KS_0002 CGP 22:20080232-20117392

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000185053 DGCR8-002 protein_coding Mus_musculus 0 1620
ENSMUST00000184916 DGCR8-001 protein_coding Mus_musculus 0 1620
ENSMUST00000115633 Dgcr8-002 protein_coding Mus_musculus 0 1620
ENSMUST00000009321 Dgcr8-001 protein_coding Mus_musculus 0 1620
ENSMUST00000183411 DGCR8-003 retained_intron Mus_musculus 0 939
ENSMUST00000128856 Dgcr8-003 retained_intron Mus_musculus 0 939
ENSMUST00000184628 DGCR8-005 processed_transcript Mus_musculus 0 684
ENSMUST00000152033 Dgcr8-005 processed_transcript Mus_musculus 0 684
ENSMUST00000185133 DGCR8-004 retained_intron Mus_musculus 0 429
ENSMUST00000156274 Dgcr8-004 retained_intron Mus_musculus 0 429

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