C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S17 pseudogene 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000498293 RPS17P5-001 ENSG00000060303 9606 - 6:50857255-50857662 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryTestisENST00000498293
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Testis
ENST00000498293 0.136±0.00 0.148±0.00 0.225±0.00 0.262±0.00 0.240±0.00 0.033±0.00 0.037±0.00 0.035±0.00 0.158±0.00 0.078±0.00 0.195±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007MC CIL_0007MC_0001 UCNEbase 6:50093187-51124665
CIL_000813 CIL_000813_0001 VISTA 6:50284539-50886680
CIL_00096L CIL_00096L_0001 VISTA 6:50417531-51018524
CIL_00092G CIL_00092G_0001 VISTA 6:50808492-51409496
CIL_0005MX CIL_0005MX_0001 CGP 6:50818723-52087625

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000122382 Gm11188-001 processed_pseudogene Mus_musculus 2e-16 90

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