C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proline rich 19
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000499536 PRR19-002 ENSG00000188368 9606 + 19:42308774-42310814 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastHeartLiverLungENST00000499536
Transcript ID Adipose Breast Heart Liver Lung
ENST00000499536 0.235±0.00 0.517±0.00 0.272±0.00 0.171±0.00 0.208±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005V7 CIL_0005V7_0001 CGP 19:42268537-42303546
CIL_0005V8 CIL_0005V8_0001 CGP 19:42297033-42310821
CIL_0005V5 CIL_0005V5_0001 CGP 19:42302098-42325062

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000080288 Prr19-201 protein_coding Mus_musculus 0 507
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.00000006 64
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.0000008 60

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