C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription factor Dp-2 (E2F dimerization partner 2)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000499676 TFDP2-201 ENSG00000269905 9606 - 3:141944435-142000353 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000499676
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000499676 2.116±0.00 1.496±0.00 1.348±0.48 2.612±0.00 0.797±0.00 1.162±0.17 0.339±0.00 1.098±0.07 1.678±0.00 3.083±1.17 2.235±1.44 3.630±0.86

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008I1 CIL_0008I1_0001 VISTA 3:141560621-142161968
CIL_00052D CIL_00052D_0002 CGP 3:141876124-142000353

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005667 IEA transcription factor complex
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007049 IEA cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000179065 Tfdp2-005 protein_coding Mus_musculus 0 1868
ENSMUST00000179416 Tfdp2-003 protein_coding Mus_musculus 0 1868
ENSMUST00000185644 Tfdp2-008 protein_coding Mus_musculus 0 1868
ENSMUST00000034982 Tfdp2-002 protein_coding Mus_musculus 0 1868
ENSMUST00000165768 Tfdp2-006 protein_coding Mus_musculus 0 1853
ENSMUST00000165120 Tfdp2-001 protein_coding Mus_musculus 0 1650
ENSMUST00000188750 Tfdp2-013 protein_coding Mus_musculus 0 1618
ENSMUST00000189606 Tfdp2-012 protein_coding Mus_musculus 0 1380
ENSMUST00000188008 Tfdp2-007 protein_coding Mus_musculus 0 1375
ENSMUST00000186609 Tfdp2-009 protein_coding Mus_musculus 0 821
ENSMUST00000188829 Tfdp2-015 protein_coding Mus_musculus 0 440
ENSMUST00000191133 Tfdp2-010 protein_coding Mus_musculus 0 326
ENSMUST00000190689 Tfdp2-017 retained_intron Mus_musculus 0 222
ENSMUST00000191390 Tfdp2-016 retained_intron Mus_musculus 0.000000000003 81
ENSMUST00000048099 Tmem194-001 protein_coding Mus_musculus 0.000004 60
ENSMUST00000116286 Stk40-201 protein_coding Mus_musculus 0.0006 53
ENSMUST00000127092 Stk40-002 processed_transcript Mus_musculus 0.0006 53

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