C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: twinfilin actin-binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000499914 TWF2-005 ENSG00000247596 9606 - 3:52228648-52239142 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonLiverLungOvaryPlacentaTestisENST00000499914
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Liver Lung Ovary Placenta Testis
ENST00000499914 8.910±0.00 6.378±0.00 0.404±0.00 2.492±0.00 5.630±4.12 3.581±2.55 2.858±0.00 2.106±0.00 4.791±3.85 9.838±0.01 5.993±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087C CIL_00087C_0001 VISTA 3:51705330-52307529
CIL_0008NT CIL_0008NT_0001 VISTA 3:51738719-52342071
CIL_0007WP CIL_0007WP_0001 VISTA 3:52127966-52731115

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005622 IEA intracellular
GO:0030837 IEA negative regulation of actin filament polymerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000024047 Twf2-001 protein_coding Mus_musculus 0 928
ENSMUST00000188650 Twf2-003 protein_coding Mus_musculus 0 824
ENSMUST00000187647 Twf2-004 nonsense_mediated_decay Mus_musculus 0 544

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