C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase 45
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000500704 USP45-008 ENSG00000123552 9606 - 6:99432379-99515425 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartLiverMuscleOvaryPlacentaTestisENST00000500704
Transcript ID Adipose Brain Breast Heart Liver Muscle Ovary Placenta Testis
ENST00000500704 0.270±0.00 1.177±0.00 1.442±0.00 0.275±0.07 0.738±0.00 0.216±0.00 0.503±0.00 0.081±0.00 0.145±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001YC CIL_0001YC_0002 CGP 6:99398051-99521728

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004843 IDA ubiquitin-specific protease activity
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0008270 IEA zinc ion binding
GO:0016579 IDA protein deubiquitination
GO:0036459 IEA ubiquitinyl hydrolase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000065111 Usp45-009 protein_coding Mus_musculus 0 1452
ENSMUST00000108232 Usp45-004 nonsense_mediated_decay Mus_musculus 0 1450
ENSMUST00000040429 Usp45-001 protein_coding Mus_musculus 0 1325
ENSMUST00000148304 Usp45-006 protein_coding Mus_musculus 0 784
ENSMUST00000137293 Usp45-005 nonsense_mediated_decay Mus_musculus 0 749
ENSMUST00000125262 Usp45-002 retained_intron Mus_musculus 0 534
ENSMUST00000148647 Usp45-007 nonsense_mediated_decay Mus_musculus 0 494

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