C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: colorectal neoplasia differentially expressed (non-protein coding)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000501177 CRNDE-002 ENSG00000245694 9606 - 16:54918863-54928551 lincRNA

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartLiverMuscleOvaryPlacentaENST00000501177
Transcript ID Adipose Brain Breast Heart Liver Muscle Ovary Placenta
ENST00000501177 1.218±0.00 0.117±0.01 1.113±0.00 2.729±0.00 0.142±0.07 0.899±0.00 1.197±0.00 0.670±0.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ON CIL_0007ON_0002 UCNEbase 16:51906374-55391377
CIL_0006IA CIL_0006IA_0001 CGP 16:54283304-54934485
CIL_0008ZD CIL_0008ZD_0001 VISTA 16:54323270-54924405
CIL_0008ZG CIL_0008ZG_0001 VISTA 16:54331417-54933346
CIL_0008ZF CIL_0008ZF_0001 VISTA 16:54345555-54946447
CIL_0008ZB CIL_0008ZB_0001 VISTA 16:54450731-55051703
CIL_0008ZC CIL_0008ZC_0001 VISTA 16:54465190-55066248
CIL_000986 CIL_000986_0001 VISTA 16:54740448-55341163
CIL_000989 CIL_000989_0001 VISTA 16:54745325-55346517
CIL_00098A CIL_00098A_0001 VISTA 16:54889273-55490371
CIL_000987 CIL_000987_0001 VISTA 16:54906681-55507962

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

No Homologs available.

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