C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polycystic kidney disease 2 (autosomal dominant)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000502363 PKD2-005 ENSG00000118762 9606 + 4:88056066-88075705 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000502363
Transcript ID Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000502363 12.154±0.00 2.130±0.00 11.945±0.00 1.859±0.00 3.109±0.00 8.083±0.00 4.793±0.00 1.648±0.00 7.416±2.08 13.763±0.00 9.192±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000BK CIL_0000BK_0001 CGP 4:87975650-88077777
CIL_0001RO CIL_0001RO_0002 CGP 4:88007668-88231322

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005509 IEA calcium ion binding
GO:0006811 IEA ion transport
GO:0016020 IEA membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000086831 Pkd2-001 protein_coding Mus_musculus 0 1266
ENSMUST00000130931 Pkd2-003 processed_transcript Mus_musculus 0 224

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