C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase 46
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000503060 USP46-004 ENSG00000109189 9606 - 4:52596814-52659275 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleTestisENST00000503060
Transcript ID Muscle Testis
ENST00000503060 0.487±0.00 1.555±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001CQ CIL_0001CQ_0001 CGP 4:52051331-52659335

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000068058 Usp46-001 protein_coding Mus_musculus 0 1825
ENSMUST00000119154 Usp46-002 protein_coding Mus_musculus 0 1690
ENSMUST00000128750 Usp46-003 processed_transcript Mus_musculus 0 1482
ENSDART00000066678 usp46-201 protein_coding Danio_rerio 0 701
ENSMUST00000145016 Usp46-004 protein_coding Mus_musculus 0 558
ENSMUST00000150009 Usp46-005 retained_intron Mus_musculus 0 483
ENSMUST00000152408 Usp46-006 processed_transcript Mus_musculus 0 313

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