C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: regulator of telomere elongation helicase 1 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000504490 RTEL1P1-001 ENSG00000251441 9606 + 4:112356135-112359819 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000504490
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000504490 0.006±0.00 0.039±0.00 0.234±0.00 0.008±0.00 0.149±0.13 0.134±0.11 0.036±0.00 0.161±0.00 0.036±0.03 0.188±0.11 0.151±0.00 0.036±0.02 0.025±0.00 0.094±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007P9 CIL_0007P9_0001 UCNEbase 4:110617607-112523533
CIL_00080F CIL_00080F_0001 VISTA 4:111826456-112428336
CIL_0008WR CIL_0008WR_0001 VISTA 4:112221234-112822374

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108815 Rtel1-006 protein_coding Mus_musculus 0 1720
ENSMUST00000048608 Rtel1-005 protein_coding Mus_musculus 0 1720
ENSMUST00000108814 Rtel1-007 protein_coding Mus_musculus 0 1720
ENSMUST00000054622 Rtel1-001 protein_coding Mus_musculus 0 1720
ENSMUST00000098971 Rtel1-003 protein_coding Mus_musculus 0 1720
ENSMUST00000139608 Rtel1-004 retained_intron Mus_musculus 0 1458
ENSMUST00000146273 Rtel1-002 retained_intron Mus_musculus 0 907
ENSMUST00000153112 Rtel1-009 protein_coding Mus_musculus 0 339

Loading