C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000505098 CTC-505O3.1-001 ENSG00000251118 9606 + 5:115770586-115770989 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyMuscleOvaryTestisENST00000505098
Transcript ID Adrenal Brain Breast Colon Kidney Muscle Ovary Testis
ENST00000505098 0.046±0.00 0.099±0.00 0.094±0.00 0.044±0.00 0.095±0.00 0.039±0.00 0.094±0.00 0.134±0.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119459 H3f3c-001 processed_pseudogene Mus_musculus 0 516
ENSMUST00000162814 H3f3a-003 protein_coding Mus_musculus 0 516
ENSMUST00000161308 H3f3a-001 protein_coding Mus_musculus 0 516
ENSMUST00000179671 Gm10257-201 processed_pseudogene Mus_musculus 0 510
ENSMUST00000119546 H3f3a-ps1-001 processed_pseudogene Mus_musculus 0 499
ENSMUST00000119544 H3f3a-ps2-001 processed_pseudogene Mus_musculus 0 499
ENSMUST00000077016 Gm6421-201 processed_pseudogene Mus_musculus 0 499
ENSMUST00000081026 H3f3a-006 protein_coding Mus_musculus 0 497
ENSMUST00000119560 Gm12657-001 processed_pseudogene Mus_musculus 0 494
ENSMUST00000121118 Gm13529-001 processed_pseudogene Mus_musculus 0 477
ENSMUST00000120752 Gm3835-001 processed_pseudogene Mus_musculus 0 473
ENSMUST00000179566 Gm6132-201 processed_pseudogene Mus_musculus 0 472
ENSMUST00000171334 Gm4938-201 processed_pseudogene Mus_musculus 0 453
ENSMUST00000169993 Gm17136-001 processed_pseudogene Mus_musculus 0 451
ENSMUST00000159789 H3f3a-007 protein_coding Mus_musculus 0 451
ENSMUST00000121719 Gm12271-001 processed_pseudogene Mus_musculus 0 448
ENSMUST00000121683 Gm12950-001 processed_pseudogene Mus_musculus 0 436
ENSMUST00000120136 Gm15763-001 processed_pseudogene Mus_musculus 0 409
ENSMUST00000117894 Gm14529-001 processed_pseudogene Mus_musculus 0 409
ENSMUST00000120730 Gm15220-001 processed_pseudogene Mus_musculus 0 315
ENSMUST00000118436 Gm13349-001 processed_pseudogene Mus_musculus 0 311
ENSMUST00000077630 RP23-249L15.2-001 processed_pseudogene Mus_musculus 0 296
ENSMUST00000119660 Gm8757-001 processed_pseudogene Mus_musculus 0 291
ENSMUST00000174739 Gm20545-001 processed_pseudogene Mus_musculus 0 279
ENSMUST00000186232 RP23-128A11.4-001 processed_pseudogene Mus_musculus 0 239
ENSMUST00000137042 Gm15905-001 processed_pseudogene Mus_musculus 0 220

Loading